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Intron Name: Anas_platyrhynchos_platyrhynchos_28_1188497_1195240_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1188497 - 1195240

Intron Length:

6744

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGCGGC

5'SS Class:

major

3'SS Sequence:

TTTTGTTCCCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTAAA

U12 Branch Point Sequence:

GCTGCAATGATG

Flanking Amino Acid:

ENEAERGSNRGGLSPANDSG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.6

0.56

1.1

57.5

42.3

Major BPS

73.8

0.59

0.9

26.8

Major PPT

84.4

0.77

0.8

77.2

37.1

Minor 5ss

30.8

-2.2

3.3

32.5

42.6

Minor BPS

42.2

-0.7

1.9

45.09

41.4

Associated Gene:

Gene:

NMT1

Ensembl Gene ID:

ENSAPLG00000009872

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010320

1177899 - 1195368

17470