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Intron Name: Anas_platyrhynchos_platyrhynchos_28_1250909_1252828_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1250909 - 1252828

Intron Length:

1920

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCCGGCCA

5'SS Class:

major

3'SS Sequence:

CTGTTGCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCTCAA

U12 Branch Point Sequence:

TTTTGCTCTTCT

Flanking Amino Acid:

RQRVGSYEEFRDIVLASHLK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.4

0.32

1.4

54.3

44.5

Major BPS

55.4

0.13

1.2

59.5

Major PPT

76.3

0.59

0.9

69.7

36.7

Minor 5ss

25.4

-2.8

3.1

31.6

42.2

Minor BPS

38.2

-0.8

3.8

76.35

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010875

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011316

1248413 - 1252971

4559