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Intron Name: Anas_platyrhynchos_platyrhynchos_28_1254267_1254923_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1254267 - 1254923

Intron Length:

657

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCGGG

5'SS Class:

strong_major

3'SS Sequence:

ACATTGCGTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAA

U12 Branch Point Sequence:

TAATTGTGAACA

Flanking Amino Acid:

LGREAKDLDELEDDDDDDDM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

63.1

43.4

Major BPS

72.1

0.55

1.2

63.4

44.3

Major PPT

65.1

0.34

1.1

58.2

42.3

Minor 5ss

30.3

-2.3

3.3

37.8

47.1

Minor BPS

49.9

-0

2.1

66.14

39.8

Associated Gene:

Gene:

EFTUD2

Ensembl Gene ID:

ENSAPLG00000011036

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027346

1254162 - 1275159

20998

ENSAPLT00000011557

1254161 - 1275687

21527