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Intron Name: Anas_platyrhynchos_platyrhynchos_28_1258493_1259405_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1258493 - 1259405

Intron Length:

913

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

TCCTGTCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTCTTTTAATT

Flanking Amino Acid:

YTDILFTEQERGVGIKSTPV

Intron Amino Acid Position:

177

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.8

1.06

0.7

81.4

32.7

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

0.74

0.8

80.2

31.8

Minor 5ss

-2.1

3.1

39.6

46.4

Minor BPS

77.3

0.94

88.63

29.6

Associated Gene:

Gene:

EFTUD2

Ensembl Gene ID:

ENSAPLG00000011036

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027346

1254162 - 1275159

20998

ENSAPLT00000011557

1254161 - 1275687

21527