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Intron Name: Anas_platyrhynchos_platyrhynchos_28_1262548_1264215_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1262548 - 1264215

Intron Length:

1668

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGGATT

5'SS Class:

strong_major

3'SS Sequence:

CCTTTTCCTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAA

U12 Branch Point Sequence:

TGTTATTTAAAA

Flanking Amino Acid:

SFAKIYADTYGDINYQEFAK

Intron Amino Acid Position:

332

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

0.9

80.3

33.8

Major BPS

81.6

0.78

0.8

24.9

Major PPT

82.6

0.73

0.7

81.3

23.8

Minor 5ss

32.9

-2

3.4

45.4

43.9

Minor BPS

64.9

0.46

1.6

74.66

36.2

Associated Gene:

Gene:

EFTUD2

Ensembl Gene ID:

ENSAPLG00000011036

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027346

1254162 - 1275159

20998

ENSAPLT00000011557

1254161 - 1275687

21527