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Intron Name: Anas_platyrhynchos_platyrhynchos_28_1265502_1266513_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1265502 - 1266513

Intron Length:

1012

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAC|GTAAGGAAA

5'SS Class:

major

3'SS Sequence:

CTTCCCTGGGAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

GCATTTTGAAAG

Flanking Amino Acid:

GEAMSECDPDGPLMCHTTKM

Intron Amino Acid Position:

472

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.8

0.58

1.3

74.9

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

56.3

0.14

1.2

59.5

35.9

Minor 5ss

-1.9

3.1

38.7

40.1

Minor BPS

-0.3

1.6

46.62

Associated Gene:

Gene:

EFTUD2

Ensembl Gene ID:

ENSAPLG00000011036

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027346

1254162 - 1275159

20998

ENSAPLT00000011557

1254161 - 1275687

21527