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Intron Name: Anas_platyrhynchos_platyrhynchos_28_1272478_1272720_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1272478 - 1272720

Intron Length:

243

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCTGC

5'SS Class:

strong_major

3'SS Sequence:

GACTTTTGGGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

GATCTTTTGACT

Flanking Amino Acid:

SAVYTVLARRRGHVTQDAPI

Intron Amino Acid Position:

854

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

69.2

38.5

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

64.2

0.32

1.1

61.1

44.3

Minor 5ss

38.8

-1.3

50.2

46.4

Minor BPS

63.2

0.49

1.2

73.73

36.8

Associated Gene:

Gene:

EFTUD2

Ensembl Gene ID:

ENSAPLG00000011036

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027346

1254162 - 1275159

20998

ENSAPLT00000011557

1254161 - 1275687

21527