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Intron Name: Anas_platyrhynchos_platyrhynchos_28_1272875_1273868_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1272875 - 1273868

Intron Length:

994

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTCCG

5'SS Class:

strong_major

3'SS Sequence:

GGTCCTGTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAT

U12 Branch Point Sequence:

TTGCTCTCATGC

Flanking Amino Acid:

FSLSVFHHWQIVPGDPLDKS

Intron Amino Acid Position:

906

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.8

71.4

40.3

Major BPS

82.6

0.81

0.9

83.3

27.7

Major PPT

73.3

0.52

41.8

Minor 5ss

29.1

-2.4

2.7

41.9

Minor BPS

-0.4

55.37

Associated Gene:

Gene:

EFTUD2

Ensembl Gene ID:

ENSAPLG00000011036

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027346

1254162 - 1275159

20998

ENSAPLT00000011557

1254161 - 1275687

21527