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Intron Name: Anas_platyrhynchos_platyrhynchos_28_1321147_1321970_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1321147 - 1321970

Intron Length:

824

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATCAG

5'SS Class:

strong_major

3'SS Sequence:

GTGCTTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTGAT

U12 Branch Point Sequence:

ATGTCCTGATGT

Flanking Amino Acid:

PPFLKVEDQSRQFRPFHHQF

Intron Amino Acid Position:

910

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

71.2

40.6

Major BPS

78.8

0.71

67.6

40.6

Major PPT

80.3

0.68

0.9

77.2

37.1

Minor 5ss

32.9

-1.9

40.4

45.7

Minor BPS

49.7

0.05

71.19

45.5

Associated Gene:

Gene:

MEIOC

Ensembl Gene ID:

ENSAPLG00000003270

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003041

1319959 - 1362068

42110