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Intron Name: Anas_platyrhynchos_platyrhynchos_28_1335805_1337953_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1335805 - 1337953

Intron Length:

2149

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGTGTCG

5'SS Class:

major

3'SS Sequence:

CTCTTCTTGCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GACTGAT

U12 Branch Point Sequence:

GATGCTCTGACT

Flanking Amino Acid:

QIVDAKEKKEDEIQAIASMM

Intron Amino Acid Position:

100

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.3

0.43

1.1

56.8

42.9

Major BPS

65.8

0.39

1.2

57.3

41.7

Major PPT

77.8

0.63

0.9

72.4

37.8

Minor 5ss

35.7

-1.6

3.4

47.6

Minor BPS

50.7

0.1

1.8

69.46

41.4

Associated Gene:

Gene:

CCDC43

Ensembl Gene ID:

ENSAPLG00000003028

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003060

1330063 - 1340751

10689