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Intron Name: Anas_platyrhynchos_platyrhynchos_28_1338829_1340563_F

Intron Information:

Intron Rank:

Intron Class:

minor

Intron Phase:

Intron Coordinates:

1338829 - 1340563

Intron Length:

1735

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTATCCTTT

5'SS Class:

strong_minor

3'SS Sequence:

AACTCACTACCAG|C

3'SS Class:

strong_BPS

U2 Branch Point Sequence:

AACTCAC

U12 Branch Point Sequence:

TTGCCCTTAACT

Flanking Amino Acid:

GTAVNIGSEKSLFRNTNVED

Intron Amino Acid Position:

166

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.8

0.21

1.3

64.4

42.3

Major BPS

68.4

0.46

0.9

69.3

26.9

Major PPT

62.1

0.27

52.8

40.9

Minor 5ss

98.3

1.62

0.6

94.6

16.9

Minor BPS

85.6

1.2

93.78

33.9

Associated Gene:

Gene:

CCDC43

Ensembl Gene ID:

ENSAPLG00000003028

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003060

1330063 - 1340751

10689