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Intron Name: Anas_platyrhynchos_platyrhynchos_28_1357119_1358788_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1357119 - 1358788

Intron Length:

1670

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGCAGT

5'SS Class:

strong_major

3'SS Sequence:

CTTGTTTTTCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTAAC

U12 Branch Point Sequence:

TTGTTTTTCAAG

Flanking Amino Acid:

SATSQVNVKSRSCSSSLKSV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

72.7

44.5

Major BPS

75.8

0.64

0.9

75.6

25.3

Major PPT

76.4

0.59

74.9

Minor 5ss

39.7

-1.2

3.2

57.4

46.9

Minor BPS

-0.2

1.9

59.4

Associated Gene:

Gene:

MEIOC

Ensembl Gene ID:

ENSAPLG00000003270

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003323

1345961 - 1362068

16108