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Intron Name: Anas_platyrhynchos_platyrhynchos_28_1415101_1418061_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1415101 - 1418061

Intron Length:

2961

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGCAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTAAAATCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAA

U12 Branch Point Sequence:

CTCTGTTTAAAA

Flanking Amino Acid:

PGRLEVKMEIGLPDEKGRFQ

Intron Amino Acid Position:

327

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

75.9

35.2

Major BPS

73.1

0.58

79.6

29.1

Major PPT

71.6

0.49

67.5

42.2

Minor 5ss

38.8

-1.3

2.9

45.4

43.9

Minor BPS

0.09

1.9

63.66

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003325

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003483

1389894 - 1447265

57372