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Intron Name: Anas_platyrhynchos_platyrhynchos_28_1418250_1421513_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1418250 - 1421513

Intron Length:

3264

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

TTGCCCTCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTCAC

U12 Branch Point Sequence:

CTGCACTTCACT

Flanking Amino Acid:

QSTAMNRHIKASNKVEVDME

Intron Amino Acid Position:

390

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

1.3

75.3

40.8

Major BPS

68.7

0.46

71.3

Major PPT

80.4

0.68

0.8

77.5

31.2

Minor 5ss

32.3

-2

2.8

43.1

43.7

Minor BPS

50.5

0.09

70.21

46.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003325

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003483

1389894 - 1447265

57372