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Intron Name: Anas_platyrhynchos_platyrhynchos_28_1422215_1423375_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1422215 - 1423375

Intron Length:

1161

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGTTA

5'SS Class:

strong_major

3'SS Sequence:

TCCTTTGGATCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATTTTTTTAATT

Flanking Amino Acid:

RTPLVSVLLEGPPHSGKTAL

Intron Amino Acid Position:

474

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

0.9

78.1

32.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

0.43

1.1

69.3

40.6

Minor 5ss

39.7

-1.2

3.4

55.3

48.9

Minor BPS

80.4

1.03

0.9

89.47

28.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003325

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003483

1389894 - 1447265

57372