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Intron Name: Anas_platyrhynchos_platyrhynchos_28_1425952_1434780_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1425952 - 1434780

Intron Length:

8829

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAAAG

5'SS Class:

strong_major

3'SS Sequence:

GTTGTGTGGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

TGATACTTACTC

Flanking Amino Acid:

LVLLKKAPPQGRKLLIIGTT

Intron Amino Acid Position:

568

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

80.7

33.7

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

61.5

0.26

1.2

56.8

47.6

Minor 5ss

32.8

-2

2.9

39.4

46.1

Minor BPS

54.4

0.12

1.8

65.11

40.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003325

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003483

1389894 - 1447265

57372