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Intron Name: Anas_platyrhynchos_platyrhynchos_28_1435800_1445236_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1435800 - 1445236

Intron Length:

9437

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGAATT

5'SS Class:

strong_major

3'SS Sequence:

GTTTGGTATGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTAAT

U12 Branch Point Sequence:

CTTCATATACTA

Flanking Amino Acid:

LLMLIEMSLQMDPEYRVKKF

Intron Amino Acid Position:

651

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

87.4

26.6

Major BPS

86.7

0.91

0.7

84.2

21.8

Major PPT

68.5

0.42

62.6

43.4

Minor 5ss

41.1

-1

3.2

58.9

39.4

Minor BPS

42.6

-0.5

1.9

54.2

38.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003325

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003483

1389894 - 1447265

57372