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Intron Name: Anas_platyrhynchos_platyrhynchos_28_1506213_1510601_F

Intron Information:

Intron Rank:

135421

Intron Class:

major

Intron Phase:

Intron Coordinates:

1506213 - 1510601

Intron Length:

4389

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCAGC

5'SS Class:

strong_major

3'SS Sequence:

CCTTTTTCCACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAGGAC

U12 Branch Point Sequence:

CCTTTTTCCACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

72.2

39.5

Major BPS

49.9

-0

1.4

51.4

43.9

Major PPT

83.9

0.76

0.7

79.2

26.4

Minor 5ss

34.3

-1.8

2.9

44.2

Minor BPS

46.9

-0.2

1.9

42.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022858

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044974

1505933 - 1511344

5412