Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_28_1537961_1538869_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1537961 - 1538869

Intron Length:

909

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGAGT

5'SS Class:

strong_major

3'SS Sequence:

TCTTCCTCATCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATGAT

U12 Branch Point Sequence:

TCTTCCTCATCA

Flanking Amino Acid:

DIHNTNVGIKAVKNGLKTTC

Intron Amino Acid Position:

208

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.86

0.8

78.6

37.3

Major BPS

76.8

0.67

40.9

Major PPT

79.1

0.65

0.8

78.4

28.8

Minor 5ss

28.5

-2.5

3.1

39.7

45.9

Minor BPS

63.3

0.41

1.8

75.6

41.9

Associated Gene:

Gene:

WNT9B

Ensembl Gene ID:

ENSAPLG00000004493

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004622

1522752 - 1539346

16595