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Intron Name: Anas_platyrhynchos_platyrhynchos_28_1581690_1584583_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1581690 - 1584583

Intron Length:

2894

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAAGTAGG

5'SS Class:

major

3'SS Sequence:

TGTTTCCTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

TTTAATTCAAAT

Flanking Amino Acid:

LETSDKQSVHLVENEIQARI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.6

0.56

1.1

45.2

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

0.83

0.7

81.4

30.6

Minor 5ss

-1.3

2.8

52.4

44.2

Minor BPS

51.2

0.12

1.8

75.7

40.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004588

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036117

1578221 - 1591870

13650

ENSAPLT00000004710

1579441 - 1591870

12430