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Intron Name: Anas_platyrhynchos_platyrhynchos_28_1585943_1588843_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1585943 - 1588843

Intron Length:

2901

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAATATT

5'SS Class:

major

3'SS Sequence:

ATTTCCCCTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAACCAA

U12 Branch Point Sequence:

TTTCCCCTACAG

Flanking Amino Acid:

ELLARTFTTNDSDTTIPIDE

Intron Amino Acid Position:

113

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

86.2

29.1

Major BPS

49.4

-0

1.3

59.1

37.3

Major PPT

81.2

0.7

0.8

74.1

30.4

Minor 5ss

43.4

-0.7

64.4

40.1

Minor BPS

48.2

-0.2

2.1

63.25

43.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004588

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004710

1579441 - 1591870

12430