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Intron Name: Anas_platyrhynchos_platyrhynchos_28_1605818_1607972_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1605818 - 1607972

Intron Length:

2155

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGAGTGC

5'SS Class:

major

3'SS Sequence:

GTCTTCTTTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TACATTGTAATT

Flanking Amino Acid:

LWGMTNSGINRKHRDHAFTA

Intron Amino Acid Position:

297

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.4

0.46

1.1

58.1

42.1

Major BPS

84.4

0.85

1.1

34.5

Major PPT

80.7

0.69

0.8

73.3

37.2

Minor 5ss

-1.7

3.6

49.7

46.9

Minor BPS

47.7

-0.1

64.56

40.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004814

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021702

1605658 - 1619432

13775