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Intron Name: Anas_platyrhynchos_platyrhynchos_28_1608581_1609524_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1608581 - 1609524

Intron Length:

944

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGAGAA

5'SS Class:

strong_major

3'SS Sequence:

TGTCATCCTGAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTCAT

U12 Branch Point Sequence:

TTTTCTGTCATC

Flanking Amino Acid:

NDKGFIEQDIVNQSSGFQRE

Intron Amino Acid Position:

248

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

80.4

26.8

Major BPS

72.5

0.56

1.2

39.9

Major PPT

65.5

0.35

1.1

64.8

36.4

Minor 5ss

29.7

-2.3

3.3

37.8

Minor BPS

50.5

-0

2.3

73.34

38.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004814

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021702

1605658 - 1619432

13775

ENSAPLT00000004954

1598225 - 1619432

21208

ENSAPLT00000022633

1605184 - 1619432

14249