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Intron Name: Anas_platyrhynchos_platyrhynchos_28_1609652_1612070_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1609652 - 1612070

Intron Length:

2419

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCTGA

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTTCTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGAGAA

U12 Branch Point Sequence:

TGGCACGTGATT

Flanking Amino Acid:

FPYHLVKCKKSYPHVAKELA

Intron Amino Acid Position:

206

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.91

0.9

38.1

Major BPS

54.8

0.12

1.2

52.7

43.2

Major PPT

83.8

0.76

0.7

77.4

31.4

Minor 5ss

43.2

-0.7

2.9

56.2

47.9

Minor BPS

44.4

-0.3

2.1

62.1

42.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004814

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021702

1605658 - 1619432

13775

ENSAPLT00000004954

1598225 - 1619432

21208

ENSAPLT00000022633

1605184 - 1619432

14249