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Intron Name: Anas_platyrhynchos_platyrhynchos_28_1649908_1651100_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1649908 - 1651100

Intron Length:

1193

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGAACA

5'SS Class:

strong_major

3'SS Sequence:

CCTGGTTTTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAT

U12 Branch Point Sequence:

GCTCTTGTGACT

Flanking Amino Acid:

VTGMSPHFKTDENLNMLSFT

Intron Amino Acid Position:

129

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.1

0.8

0.9

76.1

32.7

Major BPS

82.6

0.81

0.9

83.3

27.7

Major PPT

78.4

0.64

0.9

71.2

38.5

Minor 5ss

39.8

-1.1

2.8

Minor BPS

46.8

-0.1

64.15

40.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015744

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016409

1635006 - 1651231

16226

ENSAPLT00000024618

1636691 - 1653555

16865