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Intron Name: Anas_platyrhynchos_platyrhynchos_28_1680148_1683074_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1680148 - 1683074

Intron Length:

2927

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGTCCA

5'SS Class:

strong_major

3'SS Sequence:

TCTGCATCTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAT

U12 Branch Point Sequence:

TACTCTGCATCT

Flanking Amino Acid:

EDHASGDTAQAPGEPGSPEL

Intron Amino Acid Position:

105

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.75

1.1

72.7

38.3

Major BPS

79.3

0.73

1.1

77.9

34.9

Major PPT

77.8

0.63

0.9

35.7

Minor 5ss

30.9

-2.2

2.6

34.6

40.9

Minor BPS

43.8

-0.3

2.3

64.84

45.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008120

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028640

1675641 - 1694052

18412

ENSAPLT00000025248

1675668 - 1691096

15429

ENSAPLT00000047869

1675641 - 1694052

18412

ENSAPLT00000020739

1675668 - 1689068

13401

ENSAPLT00000039743

1675668 - 1691096

15429

ENSAPLT00000008456

1675668 - 1694173

18506

ENSAPLT00000033858

1675641 - 1694052

18412