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Intron Name: Anas_platyrhynchos_platyrhynchos_28_1686294_1687423_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1686294 - 1687423

Intron Length:

1130

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCTAA

5'SS Class:

strong_major

3'SS Sequence:

TTCCATGTTTAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTGAT

U12 Branch Point Sequence:

TTTGTTCCAATT

Flanking Amino Acid:

GAEAEEKKPKKSSPSTANPP

Intron Amino Acid Position:

427

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.3

0.95

0.8

80.2

30.6

Major BPS

87.6

0.93

0.8

77.4

37.3

Major PPT

67.8

0.4

1.1

38.5

Minor 5ss

43.2

-0.8

2.9

55.3

48.9

Minor BPS

-0

1.9

71.91

39.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008120

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025248

1675668 - 1691096

15429

ENSAPLT00000039743

1675668 - 1691096

15429

ENSAPLT00000008456

1675668 - 1694173

18506

ENSAPLT00000036911

1676447 - 1693891

17445

ENSAPLT00000033858

1675641 - 1694052

18412

ENSAPLT00000028640

1675641 - 1694052

18412