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Intron Name: Anas_platyrhynchos_platyrhynchos_28_1688582_1689557_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1688582 - 1689557

Intron Length:

976

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAGGTGGT

5'SS Class:

major

3'SS Sequence:

CTGTAAACTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTAAA

U12 Branch Point Sequence:

TGTCTGTAAACT

Flanking Amino Acid:

PTAPKTPPSSGEQPKSGDRS

Intron Amino Acid Position:

568

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.5

0.63

1.1

67.4

Major BPS

62.9

0.32

1.2

65.3

38.6

Major PPT

67.8

0.4

59.9

40.3

Minor 5ss

33.5

-1.9

3.6

48.9

47.3

Minor BPS

48.4

-0

2.3

73.56

43.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008120

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028640

1675641 - 1694052

18412