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Intron Name: Anas_platyrhynchos_platyrhynchos_28_1729607_1733986_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1729607 - 1733986

Intron Length:

4380

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGACT

5'SS Class:

strong_major

3'SS Sequence:

CCCTCTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGTTAAT

U12 Branch Point Sequence:

CCGCGGTTAATT

Flanking Amino Acid:

DIYKQIRANKGLIVLGEAAP

Intron Amino Acid Position:

483

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.5

0.88

0.8

81.2

32.3

Major BPS

66.6

0.41

1.4

69.7

44.2

Major PPT

85.2

0.79

0.7

83.1

25.2

Minor 5ss

29.5

-2.4

3.1

40.4

45.5

Minor BPS

43.1

-0.4

2.3

56.19

46.8

Associated Gene:

Gene:

KANSL1

Ensembl Gene ID:

ENSAPLG00000009179

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042793

1709770 - 1803883

94114

ENSAPLT00000020197

1709770 - 1803883

94114

ENSAPLT00000009569

1709770 - 1777119

67350