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Intron Name: Anas_platyrhynchos_platyrhynchos_28_1734129_1775815_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1734129 - 1775815

Intron Length:

41687

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGTAGC

5'SS Class:

major

3'SS Sequence:

TCTGTTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATCAT

U12 Branch Point Sequence:

TCAAAATCATCC

Flanking Amino Acid:

KADPEQPHVPLRRRAEWRWA

Intron Amino Acid Position:

435

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.6

0.58

1.1

69.5

41.3

Major BPS

71.6

0.54

33.1

Major PPT

88.6

0.87

0.7

83.9

Minor 5ss

-1.2

2.8

55.8

41.5

Minor BPS

38.8

-0.8

46.92

41.4

Associated Gene:

Gene:

KANSL1

Ensembl Gene ID:

ENSAPLG00000009179

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042793

1709770 - 1803883

94114

ENSAPLT00000020197

1709770 - 1803883

94114

ENSAPLT00000017587

1709770 - 1777202

67433

ENSAPLT00000009569

1709770 - 1777119

67350