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Intron Name: Anas_platyrhynchos_platyrhynchos_28_1814024_1815718_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1814024 - 1815718

Intron Length:

1695

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTGGA

5'SS Class:

strong_major

3'SS Sequence:

GCTTTTATTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTTAT

U12 Branch Point Sequence:

TATGCTTTTATT

Flanking Amino Acid:

ESLVYFLIGKVYKKLGQTHL

Intron Amino Acid Position:

748

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.9

0.82

72.4

39.5

Major BPS

82.6

0.81

0.8

71.7

Major PPT

79.8

0.67

0.8

35.1

Minor 5ss

30.7

-2.2

3.4

40.4

45.8

Minor BPS

59.4

0.38

1.7

76.34

41.1

Associated Gene:

Gene:

CDC27

Ensembl Gene ID:

ENSAPLG00000009486

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030099

1811163 - 1840345

29183

ENSAPLT00000009911

1812784 - 1840345

27562