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Intron Name: Anas_platyrhynchos_platyrhynchos_28_1815794_1816783_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1815794 - 1816783

Intron Length:

990

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGATTT

5'SS Class:

strong_major

3'SS Sequence:

TCTTCCTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTAAT

U12 Branch Point Sequence:

TTGTACTTAATC

Flanking Amino Acid:

SVLFANEKYKSALQELEELK

Intron Amino Acid Position:

723

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.2

1.04

0.7

90.6

21.2

Major BPS

78.2

0.7

77.9

32.1

Major PPT

90.2

0.9

0.6

88.3

21.4

Minor 5ss

43.9

-0.7

3.2

64.8

46.5

Minor BPS

74.1

0.74

1.4

79.32

36.1

Associated Gene:

Gene:

CDC27

Ensembl Gene ID:

ENSAPLG00000009486

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009911

1812784 - 1840345

27562

ENSAPLT00000030099

1811163 - 1840345

29183