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Intron Name: Anas_platyrhynchos_platyrhynchos_28_1820109_1821469_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1820109 - 1821469

Intron Length:

1361

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAACT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTGTTCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

CTTGTTTTAAGT

Flanking Amino Acid:

AYFELAEYMQAERIFSEVRR

Intron Amino Acid Position:

520

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

78.1

36.3

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

85.6

0.8

84.1

30.8

Minor 5ss

34.7

-1.7

3.3

49.7

46.3

Minor BPS

58.1

0.33

1.8

74.22

43.6

Associated Gene:

Gene:

CDC27

Ensembl Gene ID:

ENSAPLG00000009486

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030099

1811163 - 1840345

29183

ENSAPLT00000009911

1812784 - 1840345

27562