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Intron Name: Anas_platyrhynchos_platyrhynchos_28_1828043_1828153_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1828043 - 1828153

Intron Length:

111

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATT|GTAAGTTTT

5'SS Class:

major

3'SS Sequence:

TTCTGTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTAAA

U12 Branch Point Sequence:

GGTTACTAAAAG

Flanking Amino Acid:

VLMETPQDTIELNRLNLESS

Intron Amino Acid Position:

211

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.4

0.69

82.6

30.5

Major BPS

77.5

0.68

0.8

76.2

24.6

Major PPT

89.5

0.89

0.7

87.9

29.5

Minor 5ss

48.7

-0.1

2.8

73.2

37.2

Minor BPS

47.8

-0.3

55.63

44.7

Associated Gene:

Gene:

CDC27

Ensembl Gene ID:

ENSAPLG00000009486

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009911

1812784 - 1840345

27562

ENSAPLT00000030099

1811163 - 1840345

29183