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Intron Name: Anas_platyrhynchos_platyrhynchos_28_1828309_1828803_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1828309 - 1828803

Intron Length:

495

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAGGTCTG

5'SS Class:

strong_major

3'SS Sequence:

TCCAATCTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAT

U12 Branch Point Sequence:

AACTGTTTAAAT

Flanking Amino Acid:

WSPFESLCEIGEKPDPDQTF

Intron Amino Acid Position:

159

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.9

0.82

72.7

44.5

Major BPS

82.3

0.8

0.9

87.6

25.7

Major PPT

75.7

0.58

0.9

68.2

37.1

Minor 5ss

36.4

-1.5

3.3

47.2

Minor BPS

53.1

0.17

1.9

68.5

42.4

Associated Gene:

Gene:

CDC27

Ensembl Gene ID:

ENSAPLG00000009486

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009911

1812784 - 1840345

27562

ENSAPLT00000030099

1811163 - 1840345

29183