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Intron Name: Anas_platyrhynchos_platyrhynchos_28_1828902_1829907_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1828902 - 1829907

Intron Length:

1006

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAATGTTG

5'SS Class:

major

3'SS Sequence:

ATTCTTTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAA

U12 Branch Point Sequence:

TCCCTCTAAACT

Flanking Amino Acid:

FTLSLLGHVYCKTDRLAKGS

Intron Amino Acid Position:

126

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.3

0.53

1.1

41.3

Major BPS

82.2

0.8

71.9

35.8

Major PPT

89.4

0.89

0.7

84.7

29.3

Minor 5ss

40.6

-1.1

3.3

52.4

45.8

Minor BPS

58.2

0.34

1.7

72.32

44.9

Associated Gene:

Gene:

CDC27

Ensembl Gene ID:

ENSAPLG00000009486

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009911

1812784 - 1840345

27562

ENSAPLT00000030099

1811163 - 1840345

29183