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Intron Name: Anas_platyrhynchos_platyrhynchos_28_1830034_1831811_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1830034 - 1831811

Intron Length:

1778

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

GTTTTTTAAAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

TGTTTTTTAAAA

Flanking Amino Acid:

LLAKCCVDLSKLAEGEQILS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

80.4

26.8

Major BPS

87.3

0.93

0.8

36.5

Major PPT

65.6

0.35

1.2

68.7

40.4

Minor 5ss

33.7

-1.9

3.2

40.3

40.1

Minor BPS

0.66

1.3

76.89

33.6

Associated Gene:

Gene:

CDC27

Ensembl Gene ID:

ENSAPLG00000009486

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030099

1811163 - 1840345

29183

ENSAPLT00000009911

1812784 - 1840345

27562