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Intron Name: Anas_platyrhynchos_platyrhynchos_28_1834675_1840318_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1834675 - 1840318

Intron Length:

5644

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCGACC

5'SS Class:

major

3'SS Sequence:

TCCTGTCTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTAAA

U12 Branch Point Sequence:

TCTCTCTAAACC

Flanking Amino Acid:

MTVLQEPVQAAIWQALNHY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.4

1.2

62.1

41.2

Major BPS

0.57

73.6

28.6

Major PPT

77.9

0.63

0.8

72.9

Minor 5ss

-1.4

3.3

52.9

Minor BPS

61.9

0.35

1.7

71.01

40.5

Associated Gene:

Gene:

CDC27

Ensembl Gene ID:

ENSAPLG00000009486

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009911

1812784 - 1840345

27562

ENSAPLT00000030099

1811163 - 1840345

29183