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Intron Name: Anas_platyrhynchos_platyrhynchos_28_1862796_1864161_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1862796 - 1864161

Intron Length:

1366

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAAAGC

5'SS Class:

major

3'SS Sequence:

AAAAGGCAAGAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTTTCAA

U12 Branch Point Sequence:

GTTCCGGAAATC

Flanking Amino Acid:

SKELLDLAMQLNIGGGGLGY

Intron Amino Acid Position:

370

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.7

0.51

1.1

63.4

41.4

Major BPS

0.57

1.2

77.7

37.1

Major PPT

42.6

-0.4

1.1

28.8

35.1

Minor 5ss

32.1

-2

3.2

43.8

43.5

Minor BPS

39.7

-0.8

2.6

56.01

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010544

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011076

1862694 - 1869893

7200