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Intron Name: Anas_platyrhynchos_platyrhynchos_28_1873400_1874012_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1873400 - 1874012

Intron Length:

613

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GAG|GCAAGACCC

5'SS Class:

strong_major

3'SS Sequence:

TATGACCTGCTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

TGTTTTTTAACG

Flanking Amino Acid:

PLEAFMAEVEDQAARDMKRL

Intron Amino Acid Position:

125

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.6

1.01

0.9

78.1

34.1

Major BPS

87.3

0.93

0.8

36.5

Major PPT

59.7

0.22

1.1

51.8

43.3

Minor 5ss

22.9

-3.1

3.8

34.2

41.4

Minor BPS

76.1

0.68

1.2

75.46

36.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025826

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018517

1871783 - 1875064

3282