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Intron Name: Anas_platyrhynchos_platyrhynchos_28_1879528_1880990_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1879528 - 1880990

Intron Length:

1463

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAGGTATA

5'SS Class:

major

3'SS Sequence:

TCACTTTCCATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

TTTCCATTCACT

Flanking Amino Acid:

AKIKTP*Q*LMSLLTFKTAG

Intron Amino Acid Position:

125

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

1.1

80.1

34.8

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

0.52

0.8

68.6

31.6

Minor 5ss

40.3

-1.1

3.1

54.9

42.7

Minor BPS

62.8

0.49

2.1

86.99

38.2

Associated Gene:

Gene:

CCDC47

Ensembl Gene ID:

ENSAPLG00000011325

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011798

1878006 - 1888210

10205