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Intron Name: Anas_platyrhynchos_platyrhynchos_28_1883049_1883913_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1883049 - 1883913

Intron Length:

865

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTATGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTGTAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CTATTTTTAATT

Flanking Amino Acid:

WCDFRKRCRT*VSSAAINLS

Intron Amino Acid Position:

280

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.71

70.6

39.7

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

79.8

0.67

0.9

76.6

36.3

Minor 5ss

42.5

-0.8

3.1

54.1

44.6

Minor BPS

72.1

0.77

1.2

79.64

37.1

Associated Gene:

Gene:

CCDC47

Ensembl Gene ID:

ENSAPLG00000011325

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011798

1878006 - 1888210

10205