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Intron Name: Anas_platyrhynchos_platyrhynchos_28_1884665_1885626_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1884665 - 1885626

Intron Length:

962

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTACGTACA

5'SS Class:

major

3'SS Sequence:

TTCTTTCTTATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAA

U12 Branch Point Sequence:

TCTTTCTTATAG

Flanking Amino Acid:

TSSPVQNLCKRRVSLQNCPK

Intron Amino Acid Position:

346

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.6

0.41

1.1

65.5

40.4

Major BPS

82.2

0.8

71.9

35.8

Major PPT

0.85

0.6

84.1

24.1

Minor 5ss

36.2

-1.6

2.9

39.6

39.8

Minor BPS

57.3

0.09

1.8

63.88

44.1

Associated Gene:

Gene:

CCDC47

Ensembl Gene ID:

ENSAPLG00000011325

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011798

1878006 - 1888210

10205