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Intron Name: Anas_platyrhynchos_platyrhynchos_28_1899685_1899917_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1899685 - 1899917

Intron Length:

233

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CCA|GCGAGACGG

5'SS Class:

weak_major

3'SS Sequence:

CTGCAGCTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCTCAA

U12 Branch Point Sequence:

TGGCCTGCAGCT

Flanking Amino Acid:

FVKDMVLYSAREGLMWAPLH

Intron Amino Acid Position:

232

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

53.9

0.09

1.4

45.5

42.4

Major BPS

64.3

0.36

65.6

31.9

Major PPT

70.5

0.46

65.4

40.8

Minor 5ss

17.8

-3.7

3.6

37.1

Minor BPS

40.6

-0.6

2.2

58.33

44.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010124

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010564

1892823 - 1902246

9424