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Intron Name: Anas_platyrhynchos_platyrhynchos_28_1900447_1900619_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1900447 - 1900619

Intron Length:

173

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGACCTTG

5'SS Class:

major

3'SS Sequence:

TCTCTTCCAGGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AGCAGAG

U12 Branch Point Sequence:

TTCTCTTCCAGG

Flanking Amino Acid:

FSSESRSREKVFDRLHLMYT

Intron Amino Acid Position:

167

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.1

0.52

1.2

65.8

42.7

Major BPS

40.6

-0.5

1.4

32.2

34.8

Major PPT

55.7

0.13

1.7

66.7

34.2

Minor 5ss

47.6

-0.2

2.8

64.1

47.4

Minor BPS

44.6

-0.5

2.2

54.65

46.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010124

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010564

1892823 - 1902246

9424