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Intron Name: Anas_platyrhynchos_platyrhynchos_28_1964316_1968259_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1964316 - 1968259

Intron Length:

3944

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTGAGTATT

5'SS Class:

major

3'SS Sequence:

CTCTCTGGCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTCAA

U12 Branch Point Sequence:

TCAGTCTCAAAG

Flanking Amino Acid:

PEPRSRHLSVSSQNTGRSSP

Intron Amino Acid Position:

128

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

32.8

Major BPS

0.45

1.2

71.6

36.4

Major PPT

69.5

0.44

37.5

Minor 5ss

38.4

-1.3

41.2

Minor BPS

46.6

-0.3

1.8

49.14

44.4

Associated Gene:

Gene:

MAP3K3

Ensembl Gene ID:

ENSAPLG00000013287

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013844

1950503 - 1978143

27641