Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_28_1968381_1971852_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1968381 - 1971852

Intron Length:

3472

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTACGTAAC

5'SS Class:

major

3'SS Sequence:

TTTTACCCAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

TTTTACCCAACA

Flanking Amino Acid:

ILLLSQDRNHTSSSPHSGLP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.7

0.61

1.1

74.6

35.7

Major BPS

87.6

0.93

0.9

89.3

Major PPT

76.2

0.59

0.9

71.1

34.3

Minor 5ss

37.4

-1.4

49.5

40.1

Minor BPS

56.4

0.2

2.1

78.06

37.9

Associated Gene:

Gene:

MAP3K3

Ensembl Gene ID:

ENSAPLG00000013287

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013844

1950503 - 1978143

27641