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Intron Name: Anas_platyrhynchos_platyrhynchos_28_1973357_1978096_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1973357 - 1978096

Intron Length:

4740

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTAAGTCTG

5'SS Class:

strong_major

3'SS Sequence:

GTTGTTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTCAA

U12 Branch Point Sequence:

AATTCAATAAGT

Flanking Amino Acid:

RIKFEYHGERRIIPFVRPVR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

73.1

43.9

Major BPS

74.2

0.6

0.9

75.7

Major PPT

85.2

0.79

0.9

76.9

42.1

Minor 5ss

38.3

-1.3

51.2

45.1

Minor BPS

49.6

0.05

2.1

74.29

41.7

Associated Gene:

Gene:

MAP3K3

Ensembl Gene ID:

ENSAPLG00000013287

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013844

1950503 - 1978143

27641