Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_28_2005118_2012189_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2005118 - 2012189

Intron Length:

7072

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTCAGTTGA

5'SS Class:

major

3'SS Sequence:

TGGCTTCTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TTTCTTTTGAAT

Flanking Amino Acid:

KSRGTSTVSSVQLVGLDEES

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.3

0.5

1.3

66.3

42.1

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

0.65

0.9

72.4

37.8

Minor 5ss

35.5

-1.7

2.7

41.9

44.6

Minor BPS

63.8

0.52

1.4

81.08

34.1

Associated Gene:

Gene:

DCAF7

Ensembl Gene ID:

ENSAPLG00000013326

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013905

2000926 - 2012237

11312