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Intron Name: Anas_platyrhynchos_platyrhynchos_28_2015078_2015363_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2015078 - 2015363

Intron Length:

286

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGTCCC

5'SS Class:

strong_major

3'SS Sequence:

TGCTGCCCCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAC

U12 Branch Point Sequence:

ACCCCCCGAATT

Flanking Amino Acid:

KHSLCQPNKPDPDAGTSDAE

Intron Amino Acid Position:

837

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

66.2

39.6

Major BPS

73.1

0.57

0.9

73.7

27.1

Major PPT

68.9

0.43

0.9

61.3

35.2

Minor 5ss

30.5

-2.2

2.8

37.9

39.5

Minor BPS

47.2

-0.1

1.8

61.52

42.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014145

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014745

2012240 - 2040187

27948